COMPLETE JOURNAL MANAGEMENT SYSTEM

Everything Your Journal Needs from Submission to Publication

Manna Manuscript is an end-to-end journal management system that connects manuscript submission, research-integrity screening, editorial workflows, peer review, production and publication in one configurable platform.

Whether you manage a single academic journal or an entire journal portfolio, Manna gives authors, reviewers and editorial teams one connected environment for managing the complete manuscript lifecycle.

One Connected Workflow from Submission to Distribution

Every manuscript moves through a structured publishing journey. Manna connects submission data, screening results, editorial decisions, peer review activity and production files in one continuous manuscript record.

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Explore each stage of the workflow below.

Submission & Intake

Intuitive manuscript ingestion with smart validation, metadata extraction, and portfolio routing.

Stages 01 – 03 of 16
01Initial Ingestion

Manuscript Submission & Author Portal

A streamlined, multi-step submission portal that guides authors through document upload, metadata extraction, author declaration, and file verification with zero friction.

Multi-Format Intake

Support for .docx, LaTeX/BibTeX, PDF, and supplementary files.

ORCID Integration

Instant authenticated author verification & sync.

Metadata Extraction

Parses title, abstract, affiliations, and references.

Custom Forms

Configurable declarations, disclosures, and COI checks.

Manna Manuscript Submission & Author Dashboard Interface
02Scope Alignment

Relevancy & Scope Screening

Automated semantic evaluation comparing manuscript abstracts, keywords, and topics against the target journal’s published aims, scope taxonomy, and historical acceptance profile.

  • Taxonomy and keyword matching against journal scope
  • Instant out-of-scope advisory flag for screening editors
  • Subject classification tagging for streamlined indexing
03Portfolio Optimization

Intelligent Journal Suggestion & Transfer

For publishers managing multi-journal portfolios, Manna recommends alternative journals within your organization when a submission is better suited elsewhere, retaining author submissions.

  • One-click manuscript cascades across sister journals
  • Preserves existing reviews, metadata, and files on transfer
  • Reduces author re-submission burden and accelerates time-to-decision

Research Integrity & Screening

Automated multi-layer integrity defense before editorial hand-off by preserving journal reputation.

Stages 04 – 06 of 16
04Native Integrity Engine

Plagiarism & Similarity Screening (Manna Plag)

Integrated directly into the intake pipeline. Runs automated similarity checks against global academic corpora, open access repositories, and web indices without costly third-party add-ons.

Source-Attributed Reports: Side-by-side textual comparisons with direct URL and DOI source attribution.
Automated Exclusion: Intelligent filtering of matched bibliographies, quoted passages, and author self-citations.
Editorial Review Signals: Advisory percentage flags with color-coded severity tiers.
Manna Manuscript Plagiarism & AI Content Integrity Check
05Synthetic Text Analysis

AI Content & Generated Text Detection

Performs non-destructive linguistic entropy and burstiness analysis to detect generated academic prose, providing advisory signals while preserving full editorial decision autonomy.

  • Transparent probability distribution across manuscript sections
  • Strictly advisory signal and zero automated rejections without editor review
  • Continuous calibration against emerging generative LLM models
06Reference Integrity

Citation & Crossref Reference Validation

Validates every cited reference against live Crossref and PubMed APIs. Flags phantom citations, retracted papers, broken URLs, and non-existent DOIs before peer review.

  • Automated DOI matching and Crossref verification
  • Instant Retraction Watch alerts for cited retracted publications
  • Pre-formats references to journal styling requirements

Editorial & Peer Review

Configurable review models with full editorial sovereignty and structured reviewer management.

Stages 07 – 10 of 16
07Editorial Intake

Editor Review & Section Assignment

Intelligent routing to Section Editors, Associate Editors, and Handling Editors based on subject classification, current workload, and automated institutional conflict-of-interest checks.

  • Automated institutional and co-author conflict detection
  • Real-time editor workload and active assignment capacity tracking
  • One-click desk-reject or onward referral with template letters
08Review Governance

Peer Review Management & Scoring

Supports single-blind, double-blind, triple-blind, and transparent peer review models. Features automated invitation queues, reminder sequences, and customized evaluation scorecards.

  • Reviewer database lookup with expertise, ORCID & past speed metrics
  • Automated calendar invitations with configurable reminder intervals
  • Structured, rubric-based evaluation forms with confidential editor remarks
09Decision Authority

Editor Decision & Feedback Consolidation

Complete editorial sovereignty. Consolidate reviewer remarks, redact confidential notes, and issue structured decisions: Accept, Minor Revision, Major Revision, Reject, or Transfer.

  • Side-by-side reviewer score comparison & consensus summary
  • Customizable decision letter templates with variable insertion
  • Automated author notification and revision timeline locks
10Revision Lifecycle

Final Editing & Author Revisions

Structured round-by-round revision handling. Authors submit point-by-point response matrices alongside marked-up files, enabling editors to run visual diffs between manuscript revisions.

  • Point-by-point rebuttal matrix tied directly to reviewer comments
  • Version-controlled manuscript histories with instant text diff comparison
  • Seamless transition directly to the production copyediting pipeline

Production & Standards

High-velocity publishing with automated JATS XML conversion, proofing, and Crossref DOI registration.

Stages 11 – 14 of 16
11Page Composition

Typesetting & Page Layout

Convert accepted manuscripts into print-ready and web-optimized layouts. Supports both automated layout generation and dedicated production team hand-offs with custom journal styling.

  • Custom journal typography, headers, footers, and equation styling
  • Multi-format asset extraction: high-res figures, tables, and supplementary files
  • Automated PDF galley generation with embedded hyperlinked references
12Standardized Markup

Automated JATS XML Conversion

Native conversion to JATS XML (v1.2 & v1.3 / NISO Z39.96) and PMC DTD compliance. Eliminates expensive external XML tagging vendors and guarantees indexation readiness.

  • Fully structured metadata, body text, citations, and MathML formulas
  • Automated schema validation against PubMed Central (PMC) rules
  • One-click export for archival deposits (LOCKSS, CLOCKSS, Portico)
13Quality Assurance

Proofreading & Author Sign-Off

Interactive web-based proofing environment where authors and copyeditors review galley proofs, annotate queries, and record formal approval with an immutable audit trail.

  • Interactive online proof editor with inline author query resolutions
  • Automated deadline reminders for author proof turnaround
  • Final author sign-off lock preventing unauthorized post-proof modifications
14Persistent Identifier

Crossref DOI Registration

Direct automated API integration with Crossref. Registers Digital Object Identifiers (DOIs), metadata schemas, funding data, and Crossmark update signals immediately upon scheduling.

  • Automated XML schema deposit to Crossref without manual file uploads
  • Reference linking and cited-by backlink synchronization
  • Crossmark metadata support for errata, corrigenda, and version updates

Publication & Distribution

Global dissemination, continuous publishing, and direct indexation across academic repositories.

Stages 15 – 16 of 16
15Online Release

Publish: Continuous & Issue-Based

Flexible publishing models supporting continuous Online First (Article-in-Press) releases as well as traditional volume and issue compilation with automated table of contents generation.

  • Responsive full-text HTML article pages with interactive figure zooms
  • Automated citation generators (APA, MLA, Harvard, BibTeX, RIS)
  • Automated social sharing meta cards and open graph tags
16Global Syndication

Content Distribution & Discovery Feeds

Automated metadata syndication and OAI-PMH feeds delivering publications directly into major discovery indexes, indexing services, and institutional library catalogs.

  • Direct OAI-PMH endpoints for Google Scholar, DOAJ, and Scopus
  • Automated FTP/API packaging for PubMed Central (PMC) deposits
  • Long-term digital preservation feeds for CLOCKSS and Portico

35 Integrations, Publishing Services & Standards Supported

ORCID, Crossref, PubMed, Scopus, DOAJ, Portico, Stripe, MathJax, and many more are natively connected.

Explore All Integrations

Cross-Platform Capabilities

Beyond individual stages, Manna delivers an integrated infrastructure designed for security, governance, multi-journal portfolio scale, and effortless operation.

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Multi-Journal Management

Run multiple independent journals from a single unified publisher dashboard with shared reviewer pools, distinct branding, independent editorial boards, and consolidated billing.

  • ✓ Independent journal domains & styling
  • ✓ Cross-journal reviewer network sharing
  • ✓ Portfolio-wide executive analytics
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Role-Specific Workspaces

Tailored UI views for Authors, Reviewers, Section Editors, Editors-in-Chief, Typesetters, and Publishers. Users see precisely what they need with zero clutter or navigation friction.

  • ✓ Single-click role switching with 1 login
  • ✓ Dedicated author submission hub
  • ✓ Fast-action reviewer scoring desk

Automation Engine

“Automation manages the workflow. Editors make the decisions.” Custom automated reminder triggers, deadline escalations, and status change alerts keep papers moving.

  • ✓ Automated reviewer chasing rules
  • ✓ Customizable HTML email templates
  • ✓ SLA deadline escalation paths
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Dashboards & Analytics

Live data visualization tracking manuscript throughput: time to first decision, reviewer turnaround speeds, desk-rejection ratios, geographic submission trends, and production bottlenecks.

  • ✓ Real-time turnaround time tracking
  • ✓ Acceptance rate & decision breakdowns
  • ✓ One-click executive CSV / PDF exports
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Security & Confidentiality

Enterprise-grade data protection. Unpublished manuscripts remain strictly isolated with encrypted storage, granular role-based access control, and complete audit trail logging.

  • ✓ GDPR & academic data compliance
  • ✓ AES-256 encryption at rest & in transit
  • ✓ Comprehensive immutable audit logs
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OJS Migration & Onboarding

Zero-loss migration pipeline for Open Journal Systems (OJS 2 & 3). Preserves past published archives, registered DOIs, reviewer databases, and active submissions without downtime.

A modern interface that authors and reviewers actually enjoy using.

Say goodbye to outdated, confusing academic portals. Manna gives researchers a responsive, intuitive interface with clear task lists, automated reminders, and instant status visibility.

Manna Manuscript Journal Management & Editorial Pipeline Dashboard

See What Your Journal Workflow Would Look Like Inside Manna.

We’ll configure a live demonstration around your journals, editorial stages, review model and production requirements, so you can see how Manna fits your actual workflow.

Custom workflow configuration
OJS data migration assistance
Full editorial onboarding